BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H08SP1|AL426117
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig684 1450 0.0
>3x_Contig684
Length = 2183
Score = 1450 bits (723), Expect = 0.0
Identities = 771/794 (97%), Gaps = 2/794 (0%)
Strand = Plus / Plus
Query: 1 gatcaatcaacntctcttaatgtgatatcaccttgaatatcgaatctatcccatatttta 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 gatcaatcaac-tctcttaatgtgatatcaccttgaatatcgaatctatcccatatttta 1345
Query: 61 tcgaaagtmttatcattgtatttacccttttgtgatgcgattggttctgagaaaccgaaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 tcgaaagtcttatcattgtatttacccttttgtgatgcgattggttctgagaaaccgaaa 1405
Query: 121 aatggaagagctaaattcacaaacccgttcttgtattgttcaatatctgtctttccagcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 aatggaagagctaaattcacaaacccgttcttgtattgttcaatatctgtctttccagcg 1465
Query: 181 acgactttgtatagttctaggttgaccaatcctgtaaccaaagcagtggttgtagcgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 acgactttgtatagttctaggttgaccaatcctgtaaccaaagcagtggttgtagcgatg 1525
Query: 241 gcaggaatgawacggccagcaatgaacttagtcttttgacgatcagctggttcgawagag 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1526 gcaggaatgatacggccagcaatgaacttagtcttttgacgatcagctggttcgatagag 1585
Query: 301 tagtttagagcacggttgtacgatgcagcagtaatgaactcaawawgawggtttgtatcg 360
||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||
Sbjct: 1586 tagtttagagcacggttgttcgatgcagcagtaatgaactcaatatgatggtttgtatcg 1645
Query: 361 tcatccttttcaaattcaactgggattagttggaaaccagcaaaggtagaagcatctggc 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1646 tcatccttttcaaattcaactgggattagttggaaaccagctaaggtagaagcatctggc 1705
Query: 421 aaagaagcwgccaagtwttctaagacatcgccaccaagcwggttgtwcgcgtttggatcw 480
|||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1706 aaagaagctgccaagttttctaagacatcgccaccaagctggttgttcgcgtttggatct 1765
Query: 481 ggttcatcgtcattggtttgaattttgatgtaagcatttggaataaattcaggaactata 540
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1766 ggttcatcgtcattggtttgaattttgatgtcagcttttggaataaattcaggaactata 1825
Query: 541 agcattgataggacggattgawagtagtaaawgtctggtttaccatcatcwcacctttag 600
||| ||||||||||||||||| |||||| || |||||||||||||||||| | |||||||
Sbjct: 1826 agctttgataggacggattgatagtagttaatgtctggtttaccatcatctc-cctttag 1884
Query: 601 accataattgaacgcacgcnagttagcagatgcaacgatgaagtggaagtgatctgggtt 660
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 accataattgaacgcacgcaagttagcagatgcaacgatgaagtggaagtgatctgggtt 1944
Query: 661 ttcgatattgaagactaatggttcaggggcacgctttggaccagaccagaatggctcccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 ttcgatattgaagactaatggttcaggggcacgctttggaccagaccagaatggctcccc 2004
Query: 721 ggtggatgttgttgcatccttagggaagttgtaaagaaactgttggatatcataactaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 ggtggatgttgttgcatccttagggaagttgtaaagaaactgttggatatcataactaaa 2064
Query: 781 cttcttttcaaatt 794
||||||||||||||
Sbjct: 2065 cttcttttcaaatt 2078
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5275
Number of Sequences: 1807
Number of extensions: 5275
Number of successful extensions: 124
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)